Insertion junction: CLIP2.067375_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067375
Chromosome:chromosome 4
Location:2518919
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g222300 SRS3 (1 of 1) PTHR12323//PTHR12323:SF0 - SR-RELATED CTD ASSOCIATED FACTOR 6 // CALCIUM HOMEOSTASIS ENDOPLASMIC RETICULUM PROTEIN; putative RNA-binding protein gene_edge/mRNA_edge/3'UTR
Cre04.g222350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCACGCACCGTGCACACCGCTTTACGTACATACTCAGTGCAGTAGT
Internal bar code:GGTGTACGGTCCGCAATTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAATGGAGCCTGTATGA
Suggested primer 2:TTGACCCGCTGCATACATGT