Insertion junction: CLIP2.067383_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067383
Chromosome:chromosome 3
Location:5348609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183200 CPC1 Central pair microtubule complex 1; (1 of 1) PTHR14919:SF0 - SPERM FLAGELLAR PROTEIN 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATTTAGTCTGGCGCCCACGCTGGCCGTGGGCCACGCTTGTCAGGTCG
Internal bar code:AATCCTGAAGTTGTTCCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCGTACAGTGTGTTGGG
Suggested primer 2:CATGAAGCTTCCGGCATTCG