Insertion junction: CLIP2.067387_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067387
Chromosome:chromosome 16
Location:3972350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689700 HPR5 (1 of 1) 1.1.1.272 - D-2-hydroxyacid dehydrogenase (NADP(+)); Hydroxypyruvate reductase 5 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTGCTTTGCTTTCACCTCGTTGCCCATAGAACTGCCTTCATAATTG
Internal bar code:CAATTTCACTCAATATAGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2422
LEAP-Seq percent confirming:74.7368
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCTTTATCCGCTTGC
Suggested primer 2:AGCAAGTTCACTGAGGACCG