Insertion junction: CLIP2.067390_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067390
Chromosome:chromosome 2
Location:7250053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391134 (1 of 16) IPR003903 - Ubiquitin interacting motif 3'UTR
Cre09.g391171 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTTTGCACGAGGCAACCACCATAGCTGGCATGCGCCTGATTTAGTTA
Internal bar code:TATGAATTCTGGAATAGTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3750
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCATGTTCGGTGAGGCA
Suggested primer 2:TTTCGGCCGCTTGAGTTTTG