Insertion junction: CLIP2.067400_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067400
Chromosome:chromosome 6
Location:3517210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278118 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATGCTTAAAAGCCTCAAACGCTGGATAAGTGGCAAACGGAGCCCCG
Internal bar code:CTACGCTTACGGGATTTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGTCCCCCTCCCTCCTTC
Suggested primer 2:CATGATGCAGCTTCTCGCAC