Insertion junction: CLIP2.067402_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067402
Chromosome:chromosome 6
Location:7947449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304300 POA6 20S proteasome alpha subunit F; (1 of 1) K02725 - 20S proteasome subunit alpha 6 (PSMA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCTCAAGGATGCGATGGAATAGGGGCATAGTCCCGTCGTGTGTAAC
Internal bar code:GTTGTACACGGCGGCGCAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCTTCGCCTGTATCGG
Suggested primer 2:ACAGTATGCAAAGCGTCCGA