Insertion junction: CLIP2.067416_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067416
Chromosome:chromosome 17
Location:171360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697050 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTAGAAGCCCGCTGACAAAGGGTCCCATGCGGGCTTTCCGCTCGAATT
Internal bar code:TGCCCGCGATTGCTACTGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1763
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCCAGCTCCATTCTTTC
Suggested primer 2:ATGTTTGCTCCTCCATCGCA