Insertion junction: CLIP2.067420_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067420
Chromosome:chromosome 9
Location:3612088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396846 (1 of 2) PTHR22957//PTHR22957:SF148 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // RE26521P 3'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCAGCGTAGGCGCCGTGTGGCTTGCGGTGGCAGTCTGTGGGGCCAGC
Internal bar code:AGGTAGTTATTCAGACGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCTCAAACTTACCGCGA
Suggested primer 2:ACCGTTAGCACCACTCAAGG