Insertion junction: CLIP2.067439_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067439
Chromosome:chromosome 16
Location:318983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694206 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCATGTCATTGAAATGCGTAGATGCGAATGTACCTGATGGCACGGG
Internal bar code:GGTAAGGATGGTTGAAAGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGTGAGAGGAAAGACAC
Suggested primer 2:TCCATCTCCTACACCCAGGG