Insertion junction: CLIP2.067446_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067446
Chromosome:chromosome 17
Location:5946412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742132 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAACCCACCGACGCAAGACACGGGCGAGGAGAGGCGAGAAATCGAGT
Internal bar code:GCGTGATTCTTTGTTTAAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTAACACTCGCCTGTGG
Suggested primer 2:GTGTGCACCAGTGTCGTTTC