Insertion junction: CLIP2.067451_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067451
Chromosome:chromosome 2
Location:5908096
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g117700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCAACAGATAAAGCTATTATGAAGGATTTTGACAAGTTGAAAGCCTA
Internal bar code:TATAAGCTAATGATTAATATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGTTTGGTGTGCGGACT
Suggested primer 2:CTGCCTGGTGAACATGTCCT