Insertion junction: CLIP2.067453_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067453
Chromosome:chromosome 16
Location:3602638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTTTCGGGACACCCAGTGTGATCCGGCAGAAATATGTCCAACCAGA
Internal bar code:ACAGAGTCCATAAGACCATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3061
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGTACCAATGCTTCCT
Suggested primer 2:CAGCGTATGTGATTGCTGCC