Insertion junction: CLIP2.067456_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067456
Chromosome:chromosome 12
Location:8626298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548200 (1 of 1) PTHR21004:SF0 - PEROXISOMAL LEADER PEPTIDE-PROCESSING PROTEASE 3'UTR
Cre12.g548250 (1 of 1) K13216 - nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-] (PPP1R8, NIPP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACAGGCCCTCTGACAGGACACTAGAGGGCTGTAGGACTGAAGTGTGC
Internal bar code:GGGATACATTCATGCCCGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGACACTGTAGTTGGGTG
Suggested primer 2:GCTGGAGACTGTCATTGGCT