Insertion junction: CLIP2.067465_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067465
Chromosome:chromosome 12
Location:2533504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507001 3'UTR
Cre12.g507002 (1 of 38) IPR017448 - SRCR-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAACTTGCCACGCCCCGTCCGCCTTCACCCGCCCTCCCCCCCTCGCGT
Internal bar code:TCAACGGTTCACATTGGGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTGTCAACGCAGGCAGG
Suggested primer 2:AAATTTTGCTCGTCGCCAGC