Insertion junction: CLIP2.067473_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067473
Chromosome:chromosome 4
Location:3750480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229450 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGACAGGGTTAAGGCAGGTTGGCGAGGTCCCGTAGGGTGCAGCTGA
Internal bar code:TATGCTCTTTTTCTTCGACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2616
LEAP-Seq percent confirming:62.7907
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTAATCCGAGTCAGCC
Suggested primer 2:TTAAGGCAAGCTTCTGGCGA