Insertion junction: CLIP2.067481_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067481
Chromosome:chromosome 1
Location:5797505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041550 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACAAGCGCGCAGCATCTCTGAACTGAAATATTTGGCGCAGTTGCTC
Internal bar code:CGTTAAAGCAAGTTTTATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGCTGGGGGCTTGTAG
Suggested primer 2:TGAATGCAAGTATGGGCGGT