Insertion junction: CLIP2.067488_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067488
Chromosome:chromosome 17
Location:2874100
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g718900 FAP88 Flagellar Associated Protein 88; (1 of 1) PTHR23237//PTHR23237:SF6 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 // H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCGTGGACCGGTGCGGAGGGAGGCAGCTTGGCGGTGCGTGGGTGCC
Internal bar code:GGGGCGTGGTATAGCGGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGGTGGAGAAGATGTTG
Suggested primer 2:AGTGTCAGATGCAGACAGGC