Insertion junction: CLIP2.067491_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067491
Chromosome:chromosome 3
Location:5678555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186600 5'UTR
Cre03.g186650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATATTTATATCTGTGACTGAAGATTGCTTATTACGGCTCTAATGTAGC
Internal bar code:ACTCTTGTCGGGTTGCCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1043
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACGCTAGCAGCTGTTT
Suggested primer 2:GTTAGGGGCGTGTGTGATGA