Insertion junction: CLIP2.067494_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067494
Chromosome:chromosome 6
Location:5752068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288650 (1 of 2) PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC; Putative Omega-6 fatty acid desaturase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCACTTACGGCACTGTAACTAGTATGACGCTGCCGAATTCATCAGAC
Internal bar code:GGTGGAGCGGTCTGGGATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTTCTGCGATTGCTCT
Suggested primer 2:TTGGATGTGGACTCCAAGGC