Insertion junction: CLIP2.067494_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067494
Chromosome:chromosome 6
Location:5752076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288650 (1 of 2) PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC; Putative Omega-6 fatty acid desaturase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGTATGAAGCGCCACTTGCGTGGTGCTCGCCGACCGGAATGGGCCGT
Internal bar code:GGTGGAGCGGTCTGGGATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGATGTGGACTCCAAGGC
Suggested primer 2:AAGGCTTCTGCGATTGCTCT