Insertion junction: CLIP2.067500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067500
Chromosome:chromosome 10
Location:6609259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465850 (1 of 1) K12572 - PAB-dependent poly(A)-specific ribonuclease subunit 3 (PAN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCGTCTTGAAGTGGGTTAATGGGGTTTGGGGTTGCGAAGTCCAGCGT
Internal bar code:ATCGATGCCGGAGTTCTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGAGGAAGGCACGGGAA
Suggested primer 2:ACTCACTCTACCCTCCCGAC