Insertion junction: CLIP2.067500_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067500
Chromosome:chromosome 10
Location:6609276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465850 (1 of 1) K12572 - PAB-dependent poly(A)-specific ribonuclease subunit 3 (PAN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGTGCCTCCTCCTGTGGCAGTGGGGCGCGACCGATCCATACAGTG
Internal bar code:GATGTACTATTCAGATTGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2636
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACTCTACCCTCCCGAC
Suggested primer 2:GAAAGAGGAAGGCACGGGAA