Insertion junction: CLIP2.067507_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067507
Chromosome:chromosome 3
Location:716421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145907 (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCATTGAAACCGTCATTATGGGGAAGTCATCAAAAGACAAACGCGACA
Internal bar code:AAGAAGTGGTTCGTTGCCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAACCAAGACATCGCCA
Suggested primer 2:CTCCTCCAGGTGATCCCAGA