Insertion junction: CLIP2.067510_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067510
Chromosome:chromosome 3
Location:6009555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189650 (1 of 1) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3); Histone acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAGGCATAGGCCAGAGCAATGACAGAGGGAGGGCCATGCGTGCCAAG
Internal bar code:TGATATGGGCCACTGGATCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2552
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACGCCCTCAAGAGAAT
Suggested primer 2:CTCCTCGTCGGGATTGATGG