Insertion junction: CLIP2.067511_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067511
Chromosome:chromosome 2
Location:5952817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118000 PHR2,PHR6 (1 of 2) PTHR10211 - DEOXYRIBODIPYRIMIDINE PHOTOLYASE; Putative photolyase 3'UTR
Cre02.g118050 CYCU1 U-type cyclin; (1 of 1) PTHR15615:SF20 - CYCLIN FAMILY PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCATGTGCATCACTGTAAACGGTGCAGCGGTGTGCGTTTGGGTTGC
Internal bar code:GTCATGGTCCTGACATCCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTATGGTAGGAGGCAC
Suggested primer 2:CCGGCATGCATCTACCTGAT