Insertion junction: CLIP2.067520_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067520
Chromosome:chromosome 11
Location:4082813
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGCGTGGGGGCTGCAGGGTGGGGGCTTTAGGGCTGGCTTTTAAACG
Internal bar code:TGTTATGCTAAACTCCAGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGCACGCACTTTTTCTG
Suggested primer 2:GTGAGACATGTCCACACGGT