Insertion junction: CLIP2.067532_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067532
Chromosome:chromosome 11
Location:1109368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467674 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTGTCGAGATTTCTTGACGATGACCCGATGTGGCTGCGGCAAAACG
Internal bar code:GAAGGGATGTGCCAGCGTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1921
LEAP-Seq percent confirming:49.0909
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACAGAGGAGGTGGAGGA
Suggested primer 2:TACCAGTATGCCCAGGAGCT