Insertion junction: CLIP2.067536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067536
Chromosome:chromosome 16
Location:1536116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653338 5'UTR
Cre16.g653350 (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCAAATTGCCAGCGATGGGGCGGAAGGGTGGAGCCAGTCCAGTCCCA
Internal bar code:TGGAGGTGAATGTTTGTCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:933
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTACCAGCTTCAATCGCA
Suggested primer 2:GTATGAAGAGGACGAGGGCG