Insertion junction: CLIP2.067536_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067536
Chromosome:chromosome 16
Location:1536124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653338 5'UTR
Cre16.g653350 (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATTCCATCCTTTCGCCGGTGTGCCGAGTATAGCCCAGTGAACTTTG
Internal bar code:TGGAGGTGAATGTTTGTCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1131
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGAAGAGGACGAGGGCG
Suggested primer 2:ACGTACCAGCTTCAATCGCA