Insertion junction: CLIP2.067542_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067542
Chromosome:chromosome 9
Location:4161563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399626 (1 of 1) K09919 - hypothetical protein (K09919) 3'UTR
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCACGGATGGCCCTATTACCGTGGGGGCATGTCGCACCCGTGGAGGGC
Internal bar code:GCAAGCAACGGCGGTGCGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1260
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAACTGGGTATGGACAA
Suggested primer 2:GGTGATCTGTGGTGCATGGA