Insertion junction: CLIP2.067546_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067546
Chromosome:chromosome 5
Location:3101147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755747 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAACGCCCAGGTTTTGGCCCCGGCAAACATGGTGTGGAAGGGGAAGT
Internal bar code:CGTTAATACTCATGGGGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTGGTCAGAGTCCTCCC
Suggested primer 2:CCCTCCCACCAAACCCATAC