Insertion junction: CLIP2.067550_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067550
Chromosome:chromosome 3
Location:5378852
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g183500 (1 of 1) K14851 - ribosomal RNA-processing protein 17 (RRP17, NOL12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTACTCGACGACAGCGCAACGTTGTGATATGGCCGTATGGCATGGGG
Internal bar code:TGGTTCATGCGTCCTAGATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTCTCCCTTCCGAAA
Suggested primer 2:AAGAAGGGGAAGCGGTGATG