Insertion junction: CLIP2.067554_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067554
Chromosome:chromosome 10
Location:6724965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGCTGCCCTGCCAGCCGCAGCCCGCTGCACTCATCGTTCAATCTAC
Internal bar code:TGGGGTCTGAGATTTATTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4111
LEAP-Seq percent confirming:79.6875
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTTAGACAGACAGCGC
Suggested primer 2:GCGTGAGATAGTACAGGGCC