Insertion junction: CLIP2.067561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067561
Chromosome:chromosome 17
Location:5054090
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g736150 POL1C,POL1-2 DNA polymerase I, probably mitochondrial; (1 of 5) PTHR10133 - DNA POLYMERASE I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGTGCAGGCGTGTGTACCCCACCCTCAACCAAGTGGGCACTGCCACG
Internal bar code:AGGGGTCGACAATCAATTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCAAACTCCTCCTTGTC
Suggested primer 2:CTGCCGACAATGCCGTTATG