Insertion junction: CLIP2.067568_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067568
Chromosome:chromosome 12
Location:5589175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531100 PBA2 20S proteasome beta subunit A2; (1 of 2) K02738 - 20S proteasome subunit beta 1 (PSMB6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCAGGCATCTGCCATCCCTCGGCGCAGGCATCTGGACTGCCGCGGCG
Internal bar code:CCAGCCTGTTCAGGGTACGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTAGCACCAGACTCCTT
Suggested primer 2:CGTGCCGAGTTTAGATTGCG