Insertion junction: CLIP2.067571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067571
Chromosome:chromosome 4
Location:3035263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGGGCGTCCCTCCTTCCTTAGTCCCGCTTCAAAATTTATTTTACGC
Internal bar code:AATGATTTCTGAAAGATAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6044
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGTGGGAGTAGATGAGC
Suggested primer 2:GTTGGTGACTGAGGAGCTCC