Insertion junction: CLIP2.067577_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067577
Chromosome:chromosome 5
Location:2870741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241450 FTSY1,FTSY (1 of 1) K03110 - fused signal recognition particle receptor (ftsY); Chloroplast SRP Receptor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGCTCGCGGCACAGAACTGGGCGGGTACGCCTTCGCAATGTATGGAG
Internal bar code:TTCGCGTTTTGGCTTAGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCACACCTCCTATTGC
Suggested primer 2:GCAGTTGGGTTGCAGTCATG