Insertion junction: CLIP2.067580_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067580
Chromosome:chromosome 17
Location:751013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701100 CPK8 (1 of 1) 2.7.1.83 - Pseudouridine kinase; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTATCTATCTTATCTAAGGAGGCAGGCCGTACTCAGCGCACTGGCGC
Internal bar code:TACAGTAGGATCGAGGGGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGGGATTCTGAGGGTG
Suggested primer 2:GGTTGCTGGGCTTGATCTCT