Insertion junction: CLIP2.067581_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067581
Chromosome:chromosome 17
Location:6783297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746697 FAP249 Flagellar Associated Protein 249; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGCACACCTGCCCAGCCGGTCCTGGCCCGGTTTCTATGCCCGGTGCA
Internal bar code:TGAGGGAAACGGACTAGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGTGTGTGTACGGTAC
Suggested primer 2:GAGAGCGAGACTTAGCGACC