Insertion junction: CLIP2.067584_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067584
Chromosome:chromosome 13
Location:4469964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTCGCCTGGCAGGCCCGTTGCCGCCTCGCCTCACACCTGCCTCCTCT
Internal bar code:ATACAGACGAGAGGTCTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4867
LEAP-Seq percent confirming:98.3193
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAGTGTGAGTGAGAGTG
Suggested primer 2:TCGAGGTTTCGGCCAATCAA