Insertion junction: CLIP2.067592_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067592
Chromosome:chromosome 9
Location:3244057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394806 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTGTCGAGGGGATGGCTGGTGGGTGTTATGTCATCTTGGCGTCAAAT
Internal bar code:TTTCAGTAGTGTGGGCCCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1701
LEAP-Seq percent confirming:95.7143
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTTGCAGGTCACAATT
Suggested primer 2:TGTCGTCTGTAAAGCGGGAC