Insertion junction: CLIP2.067595_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067595
Chromosome:chromosome 11
Location:3367743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476900 (1 of 1) PTHR12465//PTHR12465:SF0 - UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 // MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 20 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTGGTGTTTATTCTGCTTTCGGTATGTGCTGCTGCCAACAAAACTAC
Internal bar code:CGTCACATCAAAAGTTAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGTTTCTTGCGTGCTG
Suggested primer 2:CTGCTGGGGTATTGCTTGGA