Insertion junction: CLIP2.067600_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067600
Chromosome:chromosome 12
Location:9414535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541250 NAR1E Putative nitrite transporter; (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGAGCCATTGAGCCGACCGCGCTGACCAACGTCAATCTTCGCGCGC
Internal bar code:TTATGAGCTATGCAGGTTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GACAATTGCGGCACAGGTTT
Suggested primer 2:CCGTCCTCGAGTATGCTGAC