Insertion junction: CLIP2.067602_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067602
Chromosome:chromosome 11
Location:1280676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467699 SEC1 Vesicle trafficking protein Sec1; (1 of 1) K15292 - syntaxin-binding protein 1 (STXBP1, MUNC18-1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCTGCGGCTCGAGGAGAGCAGCCGGAGCAAAGCGGACTCTTTGGCGT
Internal bar code:TAACGGGACCAAGTATGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCCGGGGTGGGTTGAAT
Suggested primer 2:GGGAGAGCTCGTGATACGTG