Insertion junction: CLIP2.067616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067616
Chromosome:chromosome 17
Location:2011123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710700 (1 of 4) PTHR23257:SF490 - DUAL SPECIFICITY PROTEIN KINASE SHKE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATGCAGAGAATTACCACACGAAGACATCGCCCCGCACGGGCAGTGAT
Internal bar code:CCCGCATGTAACACTGCGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCACACATCCTCAACT
Suggested primer 2:TCACGACTTTCGCTCGAACA