Insertion junction: CLIP2.067619_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067619
Chromosome:chromosome 2
Location:491369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076300 UROD2,UPD2 Uroporphyrinogen-III decarboxylase; (1 of 1) PTHR21091:SF105 - UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 3'UTR
Cre02.g076350 ATPVB1,ATPVB Vacuolar ATP synthase subunit B; (1 of 1) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTGCTTAGCGCGTCAGTCGAAGGAAACCGGAAACGTATCCGGTGTA
Internal bar code:AGCGTCGTGGCGCACGTCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTTAACACGCTTCCCCC
Suggested primer 2:GTAGCCTCAAATCCCCTCCG