Insertion junction: CLIP2.067639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067639
Chromosome:chromosome 17
Location:2549558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715950 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCTCGGAAGCCTGCCGGAAGCCTCAGGAGCCTAACGGGTCCTGTCT
Internal bar code:GGTGTGAAGATCGAGCAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:24.0741
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAACTGCTCGGTGTGTGG
Suggested primer 2:AAGAGGAGGAGGAGCAGGAG