Insertion junction: CLIP2.067639_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067639
Chromosome:chromosome 17
Location:2549563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715950 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAGTTGCGAGGACTCTGCGGCATTCAGCCAACAACGCCAAGTCCTGC
Internal bar code:GGTGTGAAGATCGAGCAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1508
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGGAGGAGGAGCAGGAG
Suggested primer 2:ACTAACTGCTCGGTGTGTGG