Insertion junction: CLIP2.067640_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067640
Chromosome:chromosome 9
Location:2960182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393284 RLS8 RegA/Rls-like protein; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAAGGGTCTTGTGTGCGGTGCTTTGGGCTCCGTTGCATGGGCGGAGTG
Internal bar code:ATTTAAGCATACCGCGTGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGCTGGACGAAAGATG
Suggested primer 2:ATGCTGGAAGTGGAATTGCG