Insertion junction: CLIP2.067648_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067648
Chromosome:chromosome 1
Location:4789625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGATCGACTAATGTTGCTAGATGCGATATTGCGACAGCTGACCCCGA
Internal bar code:TTCTAGCGGCCACGAATCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCAGAACGGTAGCAGG
Suggested primer 2:GTTTTGATCCGCAGCGCTAG